MraW RNA motif
Encyclopedia
The mraW RNA motif is a conserved, structured RNA
found in certain bacteria
. Specifically, it is predicted in many, though not all, species of actinobacteria
, and especially within the genus
Mycobacterium
. Structurally, the motif consists of a hairpin with a highly conserved terminal loop sequence (red nucleotide
s in diagram at right). mraW RNAs are consistently in the presumed 5' untranslated regions of mraW gene
s. These mraW genes likely form operon
s with immediately downstream ftsI genes, and multiple types of mur genes. These genes are associated with peptidoglycan
synthesis, and it was hypothesized that the mraW RNA motif might regulate these genes.
RNA
Ribonucleic acid , or RNA, is one of the three major macromolecules that are essential for all known forms of life....
found in certain bacteria
Bacteria
Bacteria are a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals...
. Specifically, it is predicted in many, though not all, species of actinobacteria
Actinobacteria
Actinobacteria are a group of Gram-positive bacteria with high guanine and cytosine content. They can be terrestrial or aquatic. Actinobacteria is one of the dominant phyla of the bacteria....
, and especially within the genus
Genus
In biology, a genus is a low-level taxonomic rank used in the biological classification of living and fossil organisms, which is an example of definition by genus and differentia...
Mycobacterium
Mycobacterium
Mycobacterium is a genus of Actinobacteria, given its own family, the Mycobacteriaceae. The genus includes pathogens known to cause serious diseases in mammals, including tuberculosis and leprosy...
. Structurally, the motif consists of a hairpin with a highly conserved terminal loop sequence (red nucleotide
Nucleotide
Nucleotides are molecules that, when joined together, make up the structural units of RNA and DNA. In addition, nucleotides participate in cellular signaling , and are incorporated into important cofactors of enzymatic reactions...
s in diagram at right). mraW RNAs are consistently in the presumed 5' untranslated regions of mraW gene
Gene
A gene is a molecular unit of heredity of a living organism. It is a name given to some stretches of DNA and RNA that code for a type of protein or for an RNA chain that has a function in the organism. Living beings depend on genes, as they specify all proteins and functional RNA chains...
s. These mraW genes likely form operon
Operon
In genetics, an operon is a functioning unit of genomic DNA containing a cluster of genes under the control of a single regulatory signal or promoter. The genes are transcribed together into an mRNA strand and either translated together in the cytoplasm, or undergo trans-splicing to create...
s with immediately downstream ftsI genes, and multiple types of mur genes. These genes are associated with peptidoglycan
Peptidoglycan
Peptidoglycan, also known as murein, is a polymer consisting of sugars and amino acids that forms a mesh-like layer outside the plasma membrane of bacteria , forming the cell wall. The sugar component consists of alternating residues of β- linked N-acetylglucosamine and N-acetylmuramic acid...
synthesis, and it was hypothesized that the mraW RNA motif might regulate these genes.